SMTL ID : 6if2.1

Complex structure of Rab35 and its effector RUSC2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: S.28, T.46, D.69 Ligands: GTP.2 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:S.28, A:T.46, H2O.1, H2O.1

1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)

GTP.2: 24 residues within 4Å: Chain A: D.22, S.23, G.24, V.25, G.26, K.27, S.28, S.29, F.39, S.40, G.41, S.42, Y.43, T.45, T.46, A.71, G.72, N.126, K.127, D.129, S.156, A.157, K.158 Ligands: MG.1 29 PLIP interactions: 28 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:G.24, A:V.25, A:G.26, A:K.27, A:S.28, A:S.28, A:S.29, A:S.29, A:S.42, A:T.46, A:T.46, A:G.72, A:N.126, A:K.127, A:K.127, A:A.157, A:K.158 Water bridges: A:S.28, A:I.44, A:T.45, A:L.73, A:K.127, A:D.129, B:R.39 Salt bridges: A:K.27, A:K.27, A:D.129 pi-Stacking: A:F.39, A:F.39

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lin, L. et al., Rab35/ACAP2 and Rab35/RUSC2 Complex Structures Reveal Molecular Basis for Effector Recognition by Rab35 GTPase. Structure (2019)

Release Date

2019-04-03

Peptides

Ras-related protein Rab-35: A
Iporin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Ras-related protein Rab-35

Iporin

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