SMTL ID : 6ifq.1

Crystal structure of a standalone versatile EAL protein from Vibrio cholerae O395 - Apo form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-dimer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: E.45, N.95, E.128, D.158 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.45, A:E.128, A:D.158, H2O.1 CA.2: 5 residues within 4Å: Chain B: E.45, N.95, E.128, D.158, K.179 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.45, B:E.128, B:D.158, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yadav, M. et al., Structures of c-di-GMP/cGAMP degrading phosphodiesterase VcEAL: identification of a novel conformational switch and its implication. Biochem.J. (2019)

Release Date

2019-10-02

Peptides

cyclic di nucleotide phoshodiesterase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

cyclic di nucleotide phoshodiesterase

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