SMTL ID : 6ija.1 (3 other biounits)

Crystal Structure of Arabidopsis thaliana UGT89C1 complexed with UDP-L-rhamnose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.21 Å

Oligo State

monomer

Ligands

1 x AWU: [[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{R},4~{R},5~{R},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl] hydrogen phosphate(Non-covalent)

AWU.1: 21 residues within 4Å: Chain A: Q.18, S.19, G.20, H.21, V.23, L.88, I.148, G.249, S.250, Q.251, W.314, A.315, Q.317, H.332, G.334, W.335, G.336, S.337, E.340, A.355, D.356 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:I.148 Hydrogen bonds: A:Q.18, A:G.20, A:H.21, A:S.250, A:A.315, A:A.315, A:Q.317, A:G.336, A:S.337, A:E.340, A:D.356 Salt bridges: A:H.332, A:H.332, A:H.357 pi-Stacking: A:W.314, A:W.314

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zong, G. et al., Crystal structures of rhamnosyltransferase UGT89C1 from Arabidopsis thaliana reveal the molecular basis of sugar donor specificity for UDP-beta-l-rhamnose and rhamnosylation mechanism. Plant J. (2019)

Release Date

2019-09-18

Peptides

UDP-glycosyltransferase 89C1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UDP-glycosyltransferase 89C1

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