SMTL ID : 6iji.2 (1 other biounit)

Crystal structure of PDE10 in complex with inhibitor 2b

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.83, H.117, D.118, D.228 Ligands: MG.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.83, A:H.117, A:D.118, A:D.228

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: H.117, D.118, E.146 Ligands: ZN.1 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.118, H2O.1, H2O.1, H2O.1

1 x AEL: 2-{2-[5-methyl-1-(pyridin-4-yl)-1H-benzimidazol-2-yl]ethyl}-1H-benzo[de]isoquinoline-1,3(2H)-dione(Non-covalent)

AEL.3: 12 residues within 4Å: Chain A: Y.78, L.229, S.231, I.246, Y.247, P.266, M.267, E.275, G.279, Q.280, G.282, F.283 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.229, A:I.246, A:P.266, A:M.267, A:E.275, A:F.283, A:F.283, A:F.283 Hydrogen bonds: A:Y.247, A:Q.280 pi-Stacking: A:F.283, A:F.283

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, Y.Y. et al., Validation of Phosphodiesterase-10 as a Novel Target for Pulmonary Arterial Hypertension via Highly Selective and Subnanomolar Inhibitors. J. Med. Chem. (2019)

Release Date

2019-04-10

Peptides

cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A

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