SMTL ID : 6ijn.1

The D295N mutant of the N6-methyl-AMP deaminase from Arabidopsis thaliana complexed with N6m-AMP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.66 Å

Oligo State

monomer

Ligands

1 x 6MZ: N6-METHYLADENOSINE-5'-MONOPHOSPHATE(Non-covalent)

6MZ.1: 18 residues within 4Å: Chain A: H.36, L.37, N.38, V.78, F.79, F.82, H.86, T.118, T.119, K.121, D.181, S.210, G.211, H.238, E.241, H.261, N.316, D.317 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:N.38, A:N.38, A:G.39, A:H.86, A:T.119, A:T.119, A:G.211, A:H.261, A:N.316 Water bridges: A:R.117, A:T.119, A:R.183, A:R.183, A:N.212, A:E.241 Salt bridges: A:H.86, A:K.121 pi-Stacking: A:H.36, A:F.79, A:H.238

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jia, Q. et al., Alternative conformation induced by substrate binding for Arabidopsis thalianaN6-methyl-AMP deaminase. Nucleic Acids Res. (2019)

Release Date

2019-02-06

Peptides

Adenosine/AMP deaminase family protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Adenosine/AMP deaminase family protein