SMTL ID : 6ijp.1

The structure of the ADAL-IMP complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.34, H.36, H.238, H.261, D.316 Ligands: IMP.2 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.34, A:H.36, A:H.238, A:D.316, H2O.2

1 x IMP: INOSINIC ACID(Non-covalent)

IMP.2: 18 residues within 4Å: Chain A: H.36, L.37, N.38, F.79, F.82, H.86, T.118, T.119, K.121, Y.133, D.181, S.210, G.211, H.238, E.241, D.316, D.317 Ligands: ZN.1 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:L.37, A:N.38, A:N.38, A:H.86, A:T.118, A:T.119, A:Y.133, A:Y.133, A:D.181, A:G.211, A:E.241 Water bridges: A:T.119, A:T.119, A:R.183, A:S.210 Salt bridges: A:H.86, A:K.121 pi-Stacking: A:H.36, A:F.79 pi-Cation interactions: A:H.238

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jia, Q. et al., Alternative conformation induced by substrate binding for Arabidopsis thalianaN6-methyl-AMP deaminase. Nucleic Acids Res. (2019)

Release Date

2019-02-06

Peptides

Adenosine/AMP deaminase family protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Adenosine/AMP deaminase family protein

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