SMTL ID : 6imq.1 (1 other biounit)

Crystal structure of PML B1-box multimers

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.06 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: C.23, E.25, C.26, H.38, L.42, H.44 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.23, A:C.26, A:H.38, A:H.44 ZN.2: 6 residues within 4Å: Chain A: C.12, R.14, C.15, E.17, C.31, C.34 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.12, A:C.15, A:C.31, A:C.34 ZN.4: 6 residues within 4Å: Chain B: C.12, R.14, C.15, E.17, C.31, C.34 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.12, B:C.15, B:C.31, B:C.34 ZN.5: 5 residues within 4Å: Chain B: C.23, C.26, H.38, L.42, H.44 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.23, B:C.26, B:H.38, B:H.44

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 5 residues within 4Å: Chain A: V.6, D.7, L.29 Chain B: F.24, R.47 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Y. et al., B1 oligomerization regulates PML nuclear body biogenesis and leukemogenesis. Nat Commun (2019)

Release Date

2019-07-31

Peptides

Protein PML: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Protein PML

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