SMTL ID : 6in0.1

Crystal structure of EphA3 in complex with 18-Crown-6

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 2 residues within 4Å: Chain A: I.177, R.178 Ligand excluded by PLIP CL.2: 3 residues within 4Å: Chain A: L.5, D.6, N.9 Ligand excluded by PLIP

2 x O4B: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE(Non-covalent)

O4B.3: 11 residues within 4Å: Chain A: G.19, E.20, F.21, K.42, F.56, E.59, M.63, I.86, T.88, L.142, S.152 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.42 Water bridges: A:S.152 O4B.4: 2 residues within 4Å: Chain A: K.35, I.37 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.35

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yokoyama, T. et al., Crown Ethers as Transthyretin Amyloidogenesis Inhibitor. To Be Published

Release Date

2019-10-30

Peptides

Ephrin type-A receptor 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ephrin type-A receptor 3