SMTL ID : 6in5.1

Crystal structure of H5N2 hemagglutinin G228S Q226L mutant with 3SLN from A/chicken/Taiwan/0502/2012

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.92 Å

Oligo State

homo-trimer

Ligands

3 x GAL- SIA: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose(Non-covalent)

GAL-SIA.1: 11 residues within 4Å: Chain A: Y.132, S.170, G.171, V.172, S.173, S.174, S.182, W.190, I.192, L.231, L.263 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:W.190, A:I.192 Hydrogen bonds: A:Y.132, A:Y.132, A:V.172, A:S.174, A:S.182 GAL-SIA.2: 11 residues within 4Å: Chain B: Y.132, S.170, G.171, V.172, S.173, S.174, S.182, W.190, I.192, L.231, L.263 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:W.190, B:I.192 Hydrogen bonds: B:Y.132, B:Y.132, B:V.172, B:S.174, B:S.182 GAL-SIA.3: 11 residues within 4Å: Chain C: Y.132, S.170, G.171, V.172, S.173, S.174, S.182, W.190, I.192, L.231, L.263 7 PLIP interactions: 7 interactions with chain C Hydrophobic interactions: C:W.190, C:I.192 Hydrogen bonds: C:Y.132, C:Y.132, C:V.172, C:S.174, C:S.182

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lin, T.H. et al., crystal structure of H5 hemagglutinin from A/chicken/Taiwan/0502/2012. To Be Published

Release Date

2019-10-30

Peptides

Hemagglutinin: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Hemagglutinin

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