SMTL ID : 6ipb.4 (3 other biounits)

Crystal Structure of the Cofactor-binding Domain of the Human Phase II Drug Metabolism Enzyme UGT2B15

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

monomer

Ligands

1 x TLA: L(+)-TARTARIC ACID(Non-covalent)

TLA.1: 11 residues within 4Å: Chain A: S.49, L.50, G.51, S.52, T.114, H.115, G.116, G.117, N.119, G.120 Ligands: GOL.2 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:S.49, A:L.50, A:G.51, A:S.52, A:T.114, A:H.115, A:G.116, A:G.117, A:G.120 Water bridges: A:T.114, A:T.114, A:T.114, A:N.119, A:I.121 Salt bridges: A:H.115

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: L.50, Q.100, N.119, G.120 Ligands: TLA.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.100 Water bridges: A:L.50, A:Q.100, A:N.119 GOL.3: 5 residues within 4Å: Chain A: G.151, D.176, V.178, Y.179, N.182 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.176, A:N.182 Water bridges: A:D.176 GOL.4: 1 residues within 4Å: Chain A: Y.122 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, L. et al., Insight into tartrate inhibition patterns in vitro and in vivo based on cocrystal structure with UDP-glucuronosyltransferase 2B15. Biochem. Pharmacol. (2019)

Release Date

2020-01-15

Peptides

UDP-glucuronosyltransferase 2B15: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

UDP-glucuronosyltransferase 2B15

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