SMTL ID : 6ir7.1

Green fluorescent protein variant GFPuv with the modification to 6-hydroxynorleucine at the C-terminus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.28 Å

Oligo State

monomer

Ligands

1 x LDO: 6-HYDROXY-L-NORLEUCINE(Covalent)

LDO.1: 4 residues within 4Å: Chain A: D.232, E.233, L.234, Y.235 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.233 Water bridges: A:H.229

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: V.55, P.56, W.57, P.58, H.137 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:W.57 Water bridges: A:W.57 Salt bridges: A:H.137

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.3: 4 residues within 4Å: Chain A: Y.149, N.162, F.163, K.164 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.164 Water bridges: A:N.147, A:K.164 Salt bridges: A:K.164

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nakatani, T. et al., Specific modification at the C-terminal lysine residue of the green fluorescent protein variant, GFPuv, expressed in Escherichia coli. Sci Rep (2019)

Release Date

2019-04-03

Peptides

Green fluorescent protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Green fluorescent protein