SMTL ID : 6j2h.2 (1 other biounit)

Crystal structure of bat (Pteropus Alecto) MHC class I Ptal-N*01:01 mutant (Met52 Asp53 Leu54 deleted) in complex with Hendra virus-derived peptide HeV1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ASP- PHE- ALA- ASN- THR- PHE- LEU- PRO: HeV1(Non-covalent)

ASP-PHE-ALA-ASN-THR-PHE-LEU-PRO.1: 23 residues within 4Å: Chain A: Y.7, Y.9, Y.59, R.62, N.63, N.66, A.70, T.73, Y.74, V.76, G.77, N.80, V.81, Y.84, R.97, Y.99, T.143, W.147, Y.152, R.155, D.156, Y.159, W.167 29 PLIP interactions: 29 interactions with chain A Hydrophobic interactions: A:Y.7, A:N.63, A:T.73, A:Y.74, A:V.76, A:V.81, A:Y.99, A:W.147, A:Y.152, A:Y.152, A:Y.152, A:Y.159 Hydrogen bonds: A:Y.7, A:N.63, A:N.63, A:N.66, A:N.80, A:R.97, A:R.97, A:Y.99, A:T.143, A:R.155, A:R.155, A:Y.159 Water bridges: A:N.66, A:D.69, A:R.97 Salt bridges: A:R.62, A:K.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lu, D. et al., Peptide presentation by bat MHC class I provides new insight into the antiviral immunity of bats. Plos Biol. (2019)

Release Date

2019-09-18

Peptides

Ptal-N*01:01 (Met52 Asp53 Leu54 deleted): A
Beta-2-microglobulin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

Ptal-N*01:01 (Met52 Asp53 Leu54 deleted)

Beta-2-microglobulin

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