SMTL ID : 6j3n.1

RORgammat LBD complexed with Ursonic Acid and SRC2.2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

monomer

Ligands

1 x LYS- ILE- LEU- HIS- ARG- LEU- LEU- GLN: LYS-ILE-LEU-HIS-ARG-LEU-LEU-GLN(Non-covalent)

LYS-ILE-LEU-HIS-ARG-LEU-LEU-GLN.1: 10 residues within 4Å: Chain A: K.73, M.79, Q.83, Q.86, I.87, L.90, P.237, L.238, E.241, E.246 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:K.73, A:I.87, A:I.87, A:L.90, A:P.237, A:L.238, A:E.241 Hydrogen bonds: A:E.241, A:E.241 Water bridges: A:E.241

1 x B8F: (5beta)-3-oxours-12-en-28-oic acid(Non-covalent)

B8F.2: 14 residues within 4Å: Chain A: Q.23, L.24, C.57, H.60, R.101, M.102, R.104, A.105, V.113, F.114, F.115, F.125, I.134, I.137 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.24, A:H.60, A:M.102, A:A.105, A:V.113, A:F.115, A:F.125, A:F.125, A:I.134, A:I.137 Water bridges: A:Q.23 Salt bridges: A:H.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Z.H. et al., Structure of human RORgammat LBD with SCR2.2 at 1.99 Angstroms resolution. To Be Published

Release Date

2020-01-15

Peptides

Nuclear receptor ROR-gamma: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nuclear receptor ROR-gamma