SMTL ID : 6j6i.1

Reconstitution and structure of a plant NLR resistosome conferring immunity

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY 3.70 Å

Oligo State

hetero-1-1-5-mer

Ligands

2 x U5P: URIDINE-5'-MONOPHOSPHATE(Covalent)

U5P.1: 8 residues within 4Å: Chain A: H.251, S.253 Chain B: D.69, V.70, K.193, F.212, G.230, T.231 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.193, B:T.231 U5P.2: 5 residues within 4Å: Chain A: T.254 Chain B: K.97, H.99, R.100, W.227 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:K.97, A:T.254 Salt bridges: B:R.100

5 x DTP: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE(Non-covalent)

DTP.3: 15 residues within 4Å: Chain C: R.149, Q.159, V.160, V.161, L.163, G.192, L.193, G.194, K.195, T.196, T.197, R.297, L.326, P.359, K.363 14 PLIP interactions: 14 interactions with chain C Hydrophobic interactions: C:T.197 Hydrogen bonds: C:V.161, C:V.161, C:G.192, C:L.193, C:G.194, C:K.195, C:T.196, C:T.196, C:T.197 Salt bridges: C:R.149, C:K.195, C:K.195, C:R.297 DTP.4: 15 residues within 4Å: Chain D: R.149, Q.159, V.160, V.161, L.163, G.192, L.193, G.194, K.195, T.196, T.197, R.297, L.326, P.359, K.363 14 PLIP interactions: 14 interactions with chain D Hydrophobic interactions: D:T.197 Hydrogen bonds: D:V.161, D:V.161, D:G.192, D:L.193, D:G.194, D:K.195, D:T.196, D:T.196, D:T.197 Salt bridges: D:R.149, D:K.195, D:K.195, D:R.297 DTP.5: 16 residues within 4Å: Chain E: R.149, Q.159, V.160, V.161, L.163, G.191, G.192, L.193, G.194, K.195, T.196, T.197, R.297, L.326, P.359, K.363 14 PLIP interactions: 14 interactions with chain E Hydrophobic interactions: E:T.197 Hydrogen bonds: E:V.161, E:V.161, E:G.192, E:L.193, E:G.194, E:K.195, E:T.196, E:T.196, E:T.197 Salt bridges: E:R.149, E:K.195, E:K.195, E:R.297 DTP.6: 15 residues within 4Å: Chain F: R.149, Q.159, V.160, V.161, L.163, G.192, L.193, G.194, K.195, T.196, T.197, R.297, L.326, P.359, K.363 14 PLIP interactions: 14 interactions with chain F Hydrophobic interactions: F:T.197 Hydrogen bonds: F:V.161, F:V.161, F:G.192, F:L.193, F:G.194, F:K.195, F:T.196, F:T.196, F:T.197 Salt bridges: F:R.149, F:K.195, F:K.195, F:R.297 DTP.7: 15 residues within 4Å: Chain G: R.149, Q.159, V.160, V.161, L.163, G.192, L.193, G.194, K.195, T.196, T.197, R.297, L.326, P.359, K.363 14 PLIP interactions: 14 interactions with chain G Hydrophobic interactions: G:T.197 Hydrogen bonds: G:V.161, G:V.161, G:G.192, G:L.193, G:G.194, G:K.195, G:T.196, G:T.196, G:T.197 Salt bridges: G:R.149, G:K.195, G:K.195, G:R.297

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, J. et al., Reconstitution and structure of a plant NLR resistosome conferring immunity. Science (2019)

Release Date

2019-03-20

Peptides

Probable serine/threonine-protein kinase PBL2: A
Protein kinase superfamily protein: B
Disease resistance RPP13-like protein 4: CDEFG

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
F

E
G

F
L

G
O

Probable serine/threonine-protein kinase PBL2

Protein kinase superfamily protein

Disease resistance RPP13-like protein 4

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