SMTL ID : 6j7b.1

Crystal structure of VASH1-SVBP in complex with epoY

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.62 Å

Oligo State

hetero-1-1-mer

Ligands

1 x BJL: N-[(3R)-4-ethoxy-3-hydroxy-4-oxobutanoyl]-L-tyrosine(Covalent)

BJL.1: 11 residues within 4Å: Chain A: F.4, Y.78, K.112, C.113, L.114, F.146, R.147, H.148, S.165, R.166, R.167 15 PLIP interactions: 14 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:R.166 Hydrogen bonds: A:Y.78, A:Y.78, A:C.113, A:L.114, A:R.147, A:H.148, A:R.166, A:R.167 Water bridges: A:E.115, B:E.50 Salt bridges: A:K.112, A:H.148, A:R.166 pi-Stacking: A:F.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liao, S. et al., Molecular basis of vasohibins-mediated detyrosination and its impact on spindle function and mitosis. Cell Res. (2019)

Release Date

2019-06-19

Peptides

Tubulinyl-Tyr carboxypeptidase 1: A
Small vasohibin-binding protein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Tubulinyl-Tyr carboxypeptidase 1

Small vasohibin-binding protein