SMTL ID : 6j8l.1

Phytophthora sojae effector PsAvh240 inhibits a host aspartic protease secretion to promote infection

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

8 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: S.97, D.99 Chain B: S.97, D.99 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:S.97, B:S.97, B:D.99, A:S.97 Water bridges: A:T.100 SO4.2: 3 residues within 4Å: Chain A: G.111, A.112 Chain B: R.132 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Salt bridges: B:R.132 Hydrogen bonds: A:A.112 SO4.3: 3 residues within 4Å: Chain A: R.132 Chain B: G.111, A.112 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Water bridges: A:R.132, A:R.132 Salt bridges: A:R.132 Hydrogen bonds: B:A.112 SO4.4: 2 residues within 4Å: Chain A: R.13, N.17 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.17 Salt bridges: A:R.13 SO4.5: 2 residues within 4Å: Chain B: L.48, R.90 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.90 SO4.6: 3 residues within 4Å: Chain B: S.52, R.106, K.109 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:R.106, B:K.109 SO4.7: 3 residues within 4Å: Chain B: Q.8, R.11, W.35 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Q.8, B:Q.39 Salt bridges: B:R.11 SO4.8: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guo, B. et al., Phytophthora sojae Effector PsAvh240 Inhibits Host Aspartic Protease Secretion to Promote Infection. Mol Plant (2019)

Release Date

2019-02-06

Peptides

Avh240: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Avh240