SMTL ID : 6jci.1

Crystal structure of Prolyl Endopeptidase from Haliotis discus hannai with SUAM-14746

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.49 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: W.185, V.186, T.187, E.204, R.205, V.206, S.232 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:V.186, A:E.204, A:R.205, A:V.206, A:V.206 Water bridges: A:R.205, A:R.205 GOL.2: 5 residues within 4Å: Chain A: Y.508, S.589, R.675, H.712 Ligands: BKO.3 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.508, A:S.589, A:S.589, A:R.675

1 x BKO: 1-[4-oxidanyl-2-(1,3-thiazolidin-3-ylcarbonyl)pyrrolidin-1-yl]-4-[2-[(~{E})-2-phenylethenyl]phenoxy]butan-1-one(Non-covalent)

BKO.3: 17 residues within 4Å: Chain A: F.208, S.209, M.270, H.287, G.289, C.290, Y.508, F.511, S.589, N.590, V.615, I.626, W.630, Y.634, R.675, V.676 Ligands: GOL.2 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.208, A:F.208, A:H.287, A:I.626 Hydrogen bonds: A:R.675

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, W. et al., Crystal structure of Haliotis discus hannai Prolyl Endopeptidase. To Be Published

Release Date

2020-02-05

Peptides

Prolyl endopeptidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Prolyl endopeptidase

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