SMTL ID : 6jd6.1

An ankyrin-repeat protein complex guides cargos from inner envelope to thylakoid Tat pathway

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-1-1-mer

Ligands

10 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: R.222, N.223, R.224, D.225, K.259 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.224, A:D.225 Water bridges: A:N.223, A:N.223 Salt bridges: A:R.224, A:K.259 SO4.2: 3 residues within 4Å: Chain A: A.207, R.239, K.242 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.239, A:K.242 SO4.3: 5 residues within 4Å: Chain A: F.198, N.201, V.202, V.204, N.233 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.233 SO4.4: 4 residues within 4Å: Chain A: T.110, K.111 Chain B: D.322, K.354 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Salt bridges: B:K.354, A:K.111 SO4.5: 6 residues within 4Å: Chain A: D.257, F.258, K.259 Chain B: Y.238, L.239 Ligands: SO4.6 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.259 SO4.6: 8 residues within 4Å: Chain A: R.256, D.257, F.258, K.259, S.260, Y.261, D.262 Ligands: SO4.5 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.257, A:F.258, A:K.259, A:S.260, A:Y.261, A:D.262 SO4.7: 2 residues within 4Å: Chain A: H.163, R.166 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:H.163, A:R.166 SO4.8: 4 residues within 4Å: Chain B: R.334, R.335, S.336, D.337 10 PLIP interactions: 8 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:S.336, B:D.337, B:D.337 Water bridges: B:S.336, B:S.336, B:S.336, B:D.337, A:Q.124, A:Q.124 Salt bridges: B:R.335 SO4.9: 6 residues within 4Å: Chain A: Q.146, Y.184 Chain B: K.224, D.254, L.258, R.263 7 PLIP interactions: 2 interactions with chain A, 5 interactions with chain B Hydrogen bonds: A:Q.146, A:Y.184 Water bridges: B:K.224, B:K.224, B:D.254 Salt bridges: B:K.224, B:R.263 SO4.10: 3 residues within 4Å: Chain B: E.350, V.351, K.352 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:E.350, B:K.352

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ouyang, M. et al., An ankyrin-repeat protein complex guides cargos from inner envelope to thylakoid Tat pathway. To Be Published

Release Date

2020-02-19

Peptides

Ankyrin repeat domain-containing protein EMB506, chloroplastic: A
Ankyrin repeat domain-containing protein, chloroplastic: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ankyrin repeat domain-containing protein EMB506, chloroplastic

Ankyrin repeat domain-containing protein, chloroplastic