SMTL ID : 6jeu.1 (1 other biounit)

K1U bound crystal peptide deformylase from Acinetobacter baumanii

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: Q.50, C.91, H.133, H.137 Ligands: K1U.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.91, A:H.133, A:H.137

1 x K1U: (3R)-3-benzyl-4-oxo-4-[(2-oxo-2-phenylethyl)sulfanyl]butanoic acid(Non-covalent)

K1U.2: 15 residues within 4Å: Chain A: G.43, I.44, G.45, Q.50, Y.87, E.89, G.90, C.91, L.92, Y.98, V.129, H.133, E.134, H.137 Ligands: ZN.1 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:I.44, A:I.44, A:I.44, A:Y.87, A:E.89, A:V.129 Hydrogen bonds: A:I.44, A:G.45, A:Q.50, A:L.92, A:Y.98 Salt bridges: A:H.133, A:H.137

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ho, T.H. et al., K1U bound crystal peptide deformylase from Acinetobacter baumanii. To be published

Release Date

2020-02-12

Peptides

Peptide deformylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptide deformylase

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