SMTL ID : 6jk2.1

Crystal structure of a mini fungal lectin, PhoSL

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.06 Å

Oligo State

homo-trimer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: G.40 Chain C: R.27 1 PLIP interactions: 1 interactions with chain C Salt bridges: C:R.27 SO4.2: 4 residues within 4Å: Chain A: G.24, D.25, W.28 Chain B: H.38 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:D.25, A:D.25 Salt bridges: B:H.38 SO4.3: 2 residues within 4Å: Chain A: R.27 Chain B: G.40 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.27 SO4.4: 4 residues within 4Å: Chain B: G.24, D.25, W.28 Chain C: H.38 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain C Hydrogen bonds: B:D.25, B:D.25 Salt bridges: C:H.38 SO4.5: 2 residues within 4Å: Chain B: R.27 Chain C: G.40 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.27 SO4.6: 4 residues within 4Å: Chain A: H.38 Chain C: G.24, D.25, W.28 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain C Salt bridges: A:H.38 Hydrogen bonds: C:D.25, C:D.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lou, Y.C. et al., Structural insights into the role of N-terminal integrity in PhoSL for core-fucosylated N-glycan recognition. Int.J.Biol.Macromol. (2023)

Release Date

2020-03-04

Peptides

Lectin: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Lectin

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