SMTL ID : 6jnn.2 (3 other biounits)

REF6 ZnF2-4-NAC004-mC1 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.9, C.14, H.27, H.31 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.9, A:C.14, A:H.27, A:H.31 ZN.2: 5 residues within 4Å: Chain A: C.39, W.41, C.44, H.57, H.61 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.39, A:C.44, A:H.57, A:H.61 ZN.3: 5 residues within 4Å: Chain A: C.69, E.71, C.74, H.87, H.93 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.69, A:C.74, A:H.87, A:H.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Qiu, Q. et al., DNA methylation repels targeting of Arabidopsis REF6. Nat Commun (2019)

Release Date

2019-03-27

Peptides

Lysine-specific demethylase REF6: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Lysine-specific demethylase REF6

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