SMTL ID : 6jr6.1 (3 other biounits)

Flavobacterium johnsoniae GH31 dextranase, FjDex31A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 6 residues within 4Å: Chain A: D.181, P.377, M.415, W.420, R.471, D.487 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.487 Water bridges: A:D.487 Salt bridges: A:R.471

2 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.2: 2 residues within 4Å: Chain A: W.420, R.428 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:W.420, A:W.420, A:W.420 Water bridges: A:R.428 MPD.3: 5 residues within 4Å: Chain A: K.42, V.44, M.54, W.66, F.73 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:K.42, A:V.44, A:W.66, A:F.73, A:F.73 Hydrogen bonds: A:K.39, A:K.39

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tsutsumi, K. et al., Structural insights into polysaccharide recognition by Flavobacterium johnsoniae dextranase, a member of glycoside hydrolase family 31. Febs J. (2020)

Release Date

2019-04-24

Peptides

Candidate alpha-glycosidase Glycoside hydrolase family 31: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Candidate alpha-glycosidase Glycoside hydrolase family 31

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