SMTL ID : 6jv9.1

Crystal Structure of Human CRMP2 1-532, unmodified

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.26 Å

Oligo State

homo-tetramer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.408, A.410 Chain D: R.408 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain D Water bridges: A:N.34 Salt bridges: A:R.408, D:R.408 SO4.3: 3 residues within 4Å: Chain A: D.508 Chain B: W.303, A.350 1 PLIP interactions: 1 interactions with chain B Water bridges: B:A.304

1 x DTT: 2,3-DIHYDROXY-1,4-DITHIOBUTANE(Non-covalent)

DTT.2: 5 residues within 4Å: Chain B: S.296, H.297, S.300, K.301, K.305 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:H.297, B:S.300, B:K.305

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 2 residues within 4Å: Chain B: R.408 Chain C: R.408 4 PLIP interactions: 1 interactions with chain B, 3 interactions with chain C Hydrogen bonds: B:R.408, C:R.408, C:R.408 Water bridges: C:Q.37

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.5: 1 residues within 4Å: Chain D: A.347 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Toyoshima, M. et al., Enhanced carbonyl stress induces irreversible multimerization of CRMP2 in schizophrenia pathogenesis. Life Sci Alliance (2019)

Release Date

2019-10-09

Peptides

Dihydropyrimidinase-related protein 2: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Dihydropyrimidinase-related protein 2

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