- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-24-mer
- Ligands
- 24 x FE2: FE (II) ION(Non-covalent)
- 12 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Covalent)(Non-covalent)
HEM.2: 15 residues within 4Å:- Chain A: L.19, I.22, N.23, F.26, F.49, M.52, E.56, Y.71
- Chain B: L.19, I.22, N.23, F.26, R.45, M.52, Y.71
8 PLIP interactions:4 interactions with chain A, 4 interactions with chain B,- Hydrophobic interactions: A:I.22, A:I.22, A:F.26, A:F.49, B:I.22, B:F.26, B:M.52
- Hydrogen bonds: B:N.23
HEM.5: 10 residues within 4Å:- Chain C: I.22, F.26, F.49, M.52, R.53, H.54, E.56
- Chain D: R.45, M.52, E.56
8 PLIP interactions:6 interactions with chain C, 2 interactions with chain D,- Hydrophobic interactions: C:I.22, C:F.26, C:F.49, C:R.53, C:E.56, D:M.52
- Hydrogen bonds: C:E.56
- Salt bridges: D:R.45
HEM.8: 13 residues within 4Å:- Chain E: I.22, N.23, F.26, R.45, F.49, M.52, Y.71
- Chain F: I.22, N.23, F.26, M.52, E.56, Y.71
11 PLIP interactions:7 interactions with chain E, 4 interactions with chain F,- Hydrophobic interactions: E:I.22, E:F.26, E:F.49, E:F.49, E:M.52, E:Y.71, F:F.26, F:F.26, F:M.52, F:Y.71
- Salt bridges: E:R.45
HEM.12: 16 residues within 4Å:- Chain H: I.22, N.23, F.26, F.49, M.52, R.53, A.55, E.56, V.57, T.59, Y.71
- Chain N: I.22, N.23, F.26, F.49, M.52
13 PLIP interactions:6 interactions with chain N, 7 interactions with chain H,- Hydrophobic interactions: N:I.22, N:F.26, N:F.49, N:F.49, N:M.52, H:I.22, H:F.26, H:F.49, H:M.52, H:E.56
- Hydrogen bonds: N:R.45, H:E.56
- Salt bridges: H:R.53
HEM.15: 10 residues within 4Å:- Chain J: I.22, R.45, M.52, E.56
- Chain K: I.22, N.23, F.26, F.49, M.52, E.56
8 PLIP interactions:6 interactions with chain K, 2 interactions with chain J,- Hydrophobic interactions: K:I.22, K:F.26, K:F.49, K:F.49, K:M.52, K:E.56, J:I.22, J:M.52
HEM.18: 10 residues within 4Å:- Chain L: F.26, F.49, M.52, R.53, E.56, Y.71
- Chain M: I.22, F.26, M.52, E.56
6 PLIP interactions:4 interactions with chain M, 2 interactions with chain L,- Hydrophobic interactions: M:I.22, M:I.22, M:F.26, M:M.52, L:F.26
- Hydrogen bonds: L:Y.71
HEM.23: 15 residues within 4Å:- Chain O: L.19, I.22, N.23, F.26, R.45, F.49, M.52, Y.71
- Chain P: L.19, I.22, N.23, F.26, M.52, E.56, Y.71
9 PLIP interactions:5 interactions with chain O, 4 interactions with chain P,- Hydrophobic interactions: O:I.22, O:F.26, O:F.49, O:F.49, O:M.52, P:L.19, P:I.22, P:F.26, P:M.52
HEM.25: 16 residues within 4Å:- Chain Q: I.22, N.23, F.26, R.45, F.49, M.52, E.56, Y.71
- Chain R: I.22, N.23, F.26, L.27, R.45, F.49, M.52, E.56
12 PLIP interactions:7 interactions with chain R, 5 interactions with chain Q,- Hydrophobic interactions: R:I.22, R:F.26, R:F.26, R:F.49, R:M.52, Q:I.22, Q:F.26, Q:F.26, Q:F.49, Q:M.52
- Salt bridges: R:K.30, R:R.45
HEM.28: 12 residues within 4Å:- Chain I: I.22, N.23, F.26, M.52, E.56, Y.71
- Chain S: I.22, N.23, F.26, R.45, F.49, M.52
13 PLIP interactions:7 interactions with chain S, 6 interactions with chain I,- Hydrophobic interactions: S:I.22, S:F.26, S:F.49, S:F.49, S:F.49, S:M.52, I:I.22, I:F.26, I:F.26, I:M.52, I:E.56, I:Y.71
- Salt bridges: S:R.45
HEM.31: 8 residues within 4Å:- Chain T: M.52, Y.71
- Chain U: L.19, I.22, N.23, F.26, M.52, E.56
6 PLIP interactions:5 interactions with chain U, 1 interactions with chain T,- Hydrophobic interactions: U:I.22, U:F.26, U:F.26, U:M.52, U:E.56, T:M.52
HEM.34: 15 residues within 4Å:- Chain V: I.22, N.23, F.26, F.49, M.52, E.56, T.59, Y.71
- Chain W: I.22, N.23, F.26, R.45, F.49, M.52, Y.71
11 PLIP interactions:7 interactions with chain W, 4 interactions with chain V,- Hydrophobic interactions: W:I.22, W:F.26, W:F.49, W:M.52, W:Y.71, V:I.22, V:F.26, V:M.52
- Salt bridges: W:K.30, W:R.45
- Hydrogen bonds: V:T.59
HEM.35: 10 residues within 4Å:- Chain G: I.22, N.23, F.26, M.52
- Chain X: I.22, N.23, F.26, F.49, M.52, E.56
5 PLIP interactions:2 interactions with chain X, 3 interactions with chain G,- Hydrophobic interactions: X:I.22, X:F.26, G:F.26, G:F.26, G:M.52
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Jobichen, C. et al., Cryo-EM structure of Bacterioferritin from Streptomyces coelicolor. To Be Published
- Release Date
- 2021-02-03
- Peptides
- Bacterioferritin: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
FF
EG
GH
HI
IJ
JK
KL
LM
MN
NO
OP
PQ
QR
RS
ST
TU
UV
VW
WX
X
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-24-mer
- Ligands
- 24 x FE2: FE (II) ION(Non-covalent)
- 12 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Covalent)(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Jobichen, C. et al., Cryo-EM structure of Bacterioferritin from Streptomyces coelicolor. To Be Published
- Release Date
- 2021-02-03
- Peptides
- Bacterioferritin: ABCDEFGHIJKLMNOPQRSTUVWX
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
FF
EG
GH
HI
IJ
JK
KL
LM
MN
NO
OP
PQ
QR
RS
ST
TU
UV
VW
WX
X