SMTL ID : 6k9g.1 (1 other biounit)

Human LXR-beta in complex with an agonist

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

2 x D3R: ~{tert}-butyl (2'~{R},3~{R})-2'-[3-[4-(hydroxymethyl)-3-methylsulfonyl-phenyl]phenyl]-2-oxidanylidene-spiro[1~{H}-indole-3,3'-pyrrolidine]-1'-carboxylate(Non-covalent)

D3R.1: 24 residues within 4Å: Chain A: F.62, F.65, T.66, L.68, A.69, S.72, E.75, I.103, M.106, L.107, E.109, T.110, R.113, I.121, F.123, L.124, F.134, L.139, I.147, H.229, Q.232, L.243, L.247, W.251 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:F.62, A:F.65, A:T.66, A:A.69, A:L.107, A:T.110, A:I.121, A:F.123, A:F.123, A:I.147, A:L.243, A:L.247 Hydrogen bonds: A:E.75, A:Q.232 pi-Stacking: A:F.123, A:F.134 D3R.2: 17 residues within 4Å: Chain B: F.65, T.66, L.68, S.72, M.106, E.109, T.110, R.113, I.121, F.123, L.124, F.134, I.147, H.229, Q.232, L.247, W.251 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:F.65, B:T.110, B:I.121, B:F.123, B:F.123, B:F.123, B:F.123, B:F.134, B:F.134, B:L.247, B:W.251

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, H. et al., Discovery of new LXR beta agonists as glioblastoma inhibitors. Eur.J.Med.Chem. (2020)

Release Date

2020-04-22

Peptides

Oxysterols receptor LXR-beta: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Oxysterols receptor LXR-beta

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