SMTL ID : 6kfv.1

GroEL from Xanthomonas oryzae pv. oryzae

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.22 Å

Oligo State

homo-14-mer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain B: K.79, N.83, R.500, S.501, Q.504, N.505 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.500, B:Q.504, B:N.505 GOL.2: 1 residues within 4Å: Chain F: N.505 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:N.505 GOL.3: 2 residues within 4Å: Chain F: A.1, D.522 3 PLIP interactions: 3 interactions with chain F Hydrogen bonds: F:A.1, F:D.522, F:D.522

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 4 residues within 4Å: Chain I: R.35, E.452, A.455, N.456 2 PLIP interactions: 2 interactions with chain I Hydrogen bonds: I:E.452 Salt bridges: I:R.35 SO4.5: 4 residues within 4Å: Chain E: E.517 Chain K: R.35, E.452, N.456 1 PLIP interactions: 1 interactions with chain K Salt bridges: K:R.35

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tran, H.T. et al., Crystal Structure of Chaperonin GroEL from Xanthomonas oryzae pv. oryzae. Crystals (2019)

Release Date

2020-07-08

Peptides

60 kDa chaperonin: ABCDEFGHIJKLMN

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

M
M

N
N

60 kDa chaperonin