SMTL ID : 6khs.1

Crystal structure of HEMK2/TRMT112 in complex with SAH and MEQ

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.89 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MEQ: N5-METHYLGLUTAMINE(Non-covalent)

MEQ.1: 11 residues within 4Å: Chain A: Y.23, D.28, N.122, P.123, P.124, Y.125, V.126, A.141, W.142, E.204 Ligands: SAH.2 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:Y.23, A:Y.125, A:V.126, A:W.142 Hydrogen bonds: A:Y.23, A:Y.23, A:Y.23, A:Y.125 Water bridges: A:Y.23

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.2: 19 residues within 4Å: Chain A: Y.23, T.29, E.51, G.53, S.54, G.55, V.59, D.77, I.78, N.79, T.102, D.103, L.104, N.122, P.124, A.140, A.141, R.154 Ligands: MEQ.1 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.23 Hydrogen bonds: A:G.53, A:I.78, A:D.103, A:D.103, A:L.104, A:N.122, A:R.154 Water bridges: A:D.21, A:G.57, A:N.79

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liao, S. et al., Crystal structure of HEMK2/TRMT112 in complex with SAH and MEQ. To Be Published

Release Date

2020-07-15

Peptides

Methyltransferase N6AMT1: A
Multifunctional methyltransferase subunit TRM112-like protein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Methyltransferase N6AMT1

Multifunctional methyltransferase subunit TRM112-like protein

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