SMTL ID : 6kmr.1

Crystal structure of human N6amt1-Trm112 in complex with SAM (space group P6122)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: Q.100, C.101, P.102, E.103, G.105 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.100

1 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.2: 18 residues within 4Å: Chain B: Y.37, T.43, E.65, G.67, S.68, G.69, V.73, D.91, I.92, T.116, D.117, L.118, N.136, P.137, P.138, A.154, A.155, R.168 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:Y.37 Hydrogen bonds: B:G.67, B:G.67, B:I.92, B:D.117, B:D.117, B:L.118, B:N.136, B:R.168 Water bridges: B:G.71, B:N.93 pi-Cation interactions: B:Y.37

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, W. et al., Structural insight into human N6amt1-Trm112 complex functioning as a protein methyltransferase. Cell Discov (2019)

Release Date

2019-09-18

Peptides

Multifunctional methyltransferase subunit TRM112-like protein: A
Methyltransferase N6AMT1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Multifunctional methyltransferase subunit TRM112-like protein

Methyltransferase N6AMT1

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