SMTL ID : 6koj.2 (1 other biounit)

Crystal structure of SNX11-PXe domain in complex with PI(3,5)P2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.14 Å

Oligo State

monomer

Ligands

1 x I35: [(2~{R})-2-butanoyloxy-3-[oxidanyl-[(2~{R},3~{R},5~{S},6~{R})-2,4,6-tris(oxidanyl)-3,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] butanoate(Non-covalent)

I35.1: 8 residues within 4Å: Chain A: R.53, Y.54, R.55, V.58, K.62, K.79, F.89, R.93 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:R.55, A:K.79, A:R.93 Water bridges: A:R.53, A:R.53, A:Y.54 Salt bridges: A:R.53, A:R.55, A:K.79, A:K.79, A:R.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, T. et al., Molecular Basis for PI(3,5)P2Recognition by SNX11, a Protein Involved in Lysosomal Degradation and Endosome Homeostasis Regulation. J.Mol.Biol. (2020)

Release Date

2020-07-08

Peptides

Sorting nexin-11: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Sorting nexin-11

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