SMTL ID : 6kqx.1

Crystal structure of Yijc from B. subtilis in complex with UDP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.44 Å

Oligo State

monomer

Ligands

1 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)

UDP.1: 16 residues within 4Å: Chain A: G.15, N.18, S.226, G.228, T.229, S.255, S.277, V.278, Q.280, H.293, G.295, M.296, N.297, S.298, E.301, Q.318 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:G.15, A:N.18, A:T.229, A:A.230, A:S.255, A:V.278, A:V.278, A:Q.280, A:Q.280, A:N.297, A:N.297, A:S.298, A:E.301, A:Q.318 Water bridges: A:F.231, A:H.293 Salt bridges: A:H.293, A:H.293

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dai, L.H. et al., Structural dissection of unnatural ginsenoside-biosynthetic UDP-glycosyltransferase Bs-YjiC from Bacillus subtilis for substrate promiscuity. Biochem.Biophys.Res.Commun. (2021)

Release Date

2020-09-30

Peptides

Uncharacterized UDP-glucosyltransferase YjiC: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Uncharacterized UDP-glucosyltransferase YjiC

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