SMTL ID : 6ktr.1 (1 other biounit)

Crystal structure of fibroblast growth factor 19 in complex with Fab

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-1-mer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain B: S.61, R.63, Q.81 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.61, B:Q.81 Salt bridges: B:R.63 SO4.2: 3 residues within 4Å: Chain C: H.31, Y.132, R.135 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:Y.132, C:Y.132 Water bridges: C:R.135, C:R.135 Salt bridges: C:H.31, C:R.135 SO4.3: 5 residues within 4Å: Chain C: K.86, S.124, S.125, A.126, R.129 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:A.126 Salt bridges: C:K.86, C:R.129 SO4.4: 4 residues within 4Å: Chain C: R.39, S.53, A.54, H.55 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:S.53, C:S.53, C:A.54, C:H.55 Salt bridges: C:R.39, C:H.55 SO4.5: 3 residues within 4Å: Chain C: R.39, A.49, R.50 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:R.50, C:G.51 Salt bridges: C:R.39, C:R.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, H. et al., Novel Abs targeting the N-terminus of fibroblast growth factor 19 inhibit hepatocellular carcinoma growth without bile-acid-related side-effects. Cancer Sci. (2020)

Release Date

2020-07-08

Peptides

G1A8-Fab-HC: A
G1A8-Fab-LC: B
Fibroblast growth factor 19: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

G1A8-Fab-HC

G1A8-Fab-LC

Fibroblast growth factor 19

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