SMTL ID : 6kvh.1

The mutant crystal structure of endo-polygalacturonase (T284A) from Talaromyces leycettanus JCM 12802

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain A: Y.171, N.193, I.195, N.222 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.193, A:N.222 Water bridges: A:N.193, A:I.194, A:I.194

1 x MAN: alpha-D-mannopyranose(Post Translational Modification)

MAN.2: 4 residues within 4Å: Chain A: C.11, F.13, S.18, S.22 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tu, T. et al., Structural Insights into the Mechanisms Underlying the Kinetic Stability of GH28 Endo-Polygalacturonase. J.Agric.Food Chem. (2021)

Release Date

2020-09-09

Peptides

endo-polygalacturonase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

endo-polygalacturonase