SMTL ID : 6kvw.1 (1 other biounit)

The complex structure of EanB/C339A/C370A and hercynine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 6 residues within 4Å: Chain A: W.219, N.220, R.269, T.417, D.440, G.441 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:W.219, A:T.417, A:D.440, A:D.440, H2O.7

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 6 residues within 4Å: Chain A: F.248, A.262, G.263, H.264, I.265, R.384 Ligand excluded by PLIP CL.3: 7 residues within 4Å: Chain A: H.188, A.189, H.190, A.196, G.246, K.247, G.263 Ligand excluded by PLIP

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 1 residues within 4Å: Chain A: P.177 No protein-ligand interaction detected (PLIP)

1 x CA: CALCIUM ION(Non-covalent)

CA.5: 5 residues within 4Å: Chain A: A.342, R.344, R.364, I.365, Y.414 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:Y.414

1 x AVJ: N,N,N-trimethyl-histidine(Non-covalent)

AVJ.6: 11 residues within 4Å: Chain A: Y.191, E.214, W.219, G.259, Y.356, Y.358, A.377, Y.378, C.415, T.417, W.419 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:W.419 Hydrogen bonds: A:G.259, A:Y.378 Salt bridges: A:E.214 pi-Cation interactions: A:Y.191, A:W.219

1 x ZN: ZINC ION(Non-covalent)

ZN.7: 2 residues within 4Å: Chain A: S.50, V.53 6 PLIP interactions: 2 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:S.50, A:V.53, H2O.5, H2O.8, H2O.9, H2O.10

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, L. et al., The complex structure of EanB/C339A/C370A and hercynine. To Be Published

Release Date

2020-09-09

Peptides

Sulfurtransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Sulfurtransferase

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