SMTL ID : 6kx3.1

Crystal structure of RhoA protein with covalent inhibitor DC-Rhoin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.98 Å

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 16 residues within 4Å: Chain A: D.13, G.14, A.15, V.16, G.17, K.18, T.19, S.20, A.61, N.117, K.118, D.120, L.121, S.160, A.161, K.162 19 PLIP interactions: 19 interactions with chain A Hydrogen bonds: A:A.15, A:V.16, A:G.17, A:K.18, A:T.19, A:T.19, A:S.20, A:S.20, A:E.64, A:N.117, A:K.118, A:K.118, A:S.160, A:A.161, A:K.162 Water bridges: A:T.19, A:E.64 Salt bridges: A:K.18, A:D.120

1 x 8ZO: prop-2-enyl (3R)-1,1-bis(oxidanylidene)-2,3-dihydro-1-benzothiophene-3-carboxylate(Covalent)

8ZO.2: 9 residues within 4Å: Chain A: K.7, T.60, P.75, T.77, I.80, E.102, V.103, F.106, C.107 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:T.60 Salt bridges: A:K.7

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sun, Z. et al., Covalent Inhibitors Allosterically Block the Activation of Rho Family Proteins and Suppress Cancer Cell Invasion. Adv Sci (2020)

Release Date

2020-08-19

Peptides

Transforming protein RhoA: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Transforming protein RhoA

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