SMTL ID : 6l4k.1 (1 other biounit)

Human serum albumin-Palmitic acid-Cu compound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.09 Å

Oligo State

monomer

Ligands

6 x PLM: PALMITIC ACID(Non-covalent)

PLM.1: 7 residues within 4Å: Chain A: R.115, L.133, Y.136, L.137, A.156, Y.159, L.180 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.133, A:Y.136, A:Y.136, A:L.137, A:A.156, A:Y.159, A:Y.159, A:Y.159, A:Y.159 Hydrogen bonds: A:L.180 Salt bridges: A:R.115 PLM.2: 12 residues within 4Å: Chain A: R.8, V.21, V.44, L.67, Y.148, P.150, L.249, A.252, R.255, A.256, L.282, S.285 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:V.21, A:V.44, A:L.67, A:P.150, A:L.282 Hydrogen bonds: A:Y.148, A:Y.148, A:S.285 Salt bridges: A:R.255 PLM.3: 12 residues within 4Å: Chain A: S.340, V.342, R.346, L.385, N.389, L.428, V.431, M.444, E.448, L.451, R.483 Ligands: PLM.4 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.385, A:N.389, A:V.431, A:E.448 Hydrogen bonds: A:S.340 Salt bridges: A:R.346, A:R.483 PLM.4: 10 residues within 4Å: Chain A: L.385, Y.409, V.416, L.455, L.458, H.462, V.471, F.486, S.487 Ligands: PLM.3 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.409, A:Y.409, A:Y.409, A:V.416, A:L.455, A:L.458, A:L.458, A:H.462, A:V.471, A:F.486 Hydrogen bonds: A:S.487 Salt bridges: A:R.408, A:K.412 PLM.5: 13 residues within 4Å: Chain A: Y.399, F.500, F.505, K.523, A.526, L.530, H.533, V.545, M.546, F.549, A.550, S.577, Q.578 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.500, A:F.505, A:K.523, A:A.526, A:L.530, A:L.530, A:V.545, A:F.549, A:F.549, A:Q.578 Hydrogen bonds: A:Y.399 Salt bridges: A:K.523 PLM.6: 10 residues within 4Å: Chain A: R.207, A.208, A.211, V.214, F.226, S.230, D.322, L.325, A.348, E.352 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:A.208, A:A.211, A:F.226, A:L.325, A:A.348

1 x E5O: 2-bromanyl-9-ethyl-~{N},~{N},7-trimethyl-3-thia-1$l^{4},5,6$l^{4},10-tetraza-2$l^{4}-cupratricyclo[6.4.0.0^{2,6}]dodeca-1(8),4,6,9,11-pentaen-4-amine(Non-covalent)

E5O.7: 11 residues within 4Å: Chain A: W.212, R.216, L.236, V.239, H.240, R.255, L.258, I.262, S.285, I.288, A.289 3 PLIP interactions: 3 interactions with chain A, Hydrophobic interactions: A:I.262, A:I.288 Metal complexes: A:H.240

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Z.L., A novel brain-tumor-inhibiting copper(II) compound based on a human serum albumin-cell penetrating peptide conjugate. To Be Published

Release Date

2020-10-21

Peptides

Serum albumin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serum albumin

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