SMTL ID : 6l67.1

X-ray structure of human galectin-10 in complex with D-galactose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.97 Å

Oligo State

homo-dimer

Ligands

4 x GAL: beta-D-galactopyranose(Non-covalent)

GAL.1: 9 residues within 4Å: Chain A: Q.39, H.55, Q.57, V.65, N.67, W.74, Q.77, R.130 Chain B: E.35 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Q.39, A:Q.57, A:N.67, A:Q.77, A:R.130 Water bridges: A:Q.39 Salt bridges: A:H.55 GAL.2: 5 residues within 4Å: Chain A: V.78, K.101, T.113, F.114, D.115 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.113, A:T.113, A:D.115 Water bridges: A:R.117, A:R.117 GAL.3: 9 residues within 4Å: Chain A: E.35 Chain B: Q.39, H.55, Q.57, V.65, N.67, W.74, Q.77, R.130 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:Q.39, B:Q.57, B:N.67, B:Q.77, B:R.130 Water bridges: B:Q.39 Salt bridges: B:H.55 GAL.4: 5 residues within 4Å: Chain B: V.78, K.101, T.113, F.114, D.115 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:T.113, B:D.115 Water bridges: B:R.117, B:R.117

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Itoh, A. et al., Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals. Biochem.Biophys.Res.Commun. (2020)

Release Date

2020-03-04

Peptides

Galectin-10: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Galectin-10

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