SMTL ID : 6la5.4 (3 other biounits)

Cryo-EM structure of echovirus 11 complexed with its attaching receptor CD55 at pH 7.4

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x SPH: SPHINGOSINE(Non-covalent)

SPH.1: 13 residues within 4Å: Chain A: I.93, F.113, M.115, I.142, Y.144, P.166, M.179, I.181, I.184, Y.190, N.192, M.214, I.217 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.93, A:Y.144, A:I.181, A:I.184, A:I.217 Hydrogen bonds: A:N.192

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Niu, S. et al., Molecular and structural basis of Echovirus 11 infection by using the dual-receptor system of CD55 and FcRn. Chin.Sci.Bull. (2020)

Release Date

2020-10-07

Peptides

Capsid protein VP1: A
Capsid protein VP2: B
Capsid protein VP3: C
Capsid protein VP4: D
Complement decay-accelerating factor: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

Capsid protein VP1

Capsid protein VP2

Capsid protein VP3

Capsid protein VP4

Complement decay-accelerating factor

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