- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 2 x ZN: ZINC ION(Non-covalent)
- 10 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
- 1 x EKG: (2R)-2,3-dihydroxypropyl hexadecanoate(Non-covalent)
EKG.11: 13 residues within 4Å:- Chain A: Y.8, F.23, V.25, R.67, V.68, A.71, F.75, T.98, M.99, S.100, Q.156, W.157, Y.160
11 PLIP interactions:11 interactions with chain A- Hydrophobic interactions: A:Y.8, A:Y.8, A:Y.8, A:F.23, A:V.25, A:V.68, A:A.71, A:F.75, A:Y.160
- Hydrogen bonds: A:Q.156
- Salt bridges: A:R.67
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Shima, Y. et al., Crystal structures of lysophospholipid-bound MHC class I molecules. J.Biol.Chem. (2020)
- Release Date
- 2020-04-29
- Peptides
- MHC class I antigen: A
Beta-2-microglobulin: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 2 x ZN: ZINC ION(Non-covalent)
- 10 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
- 1 x EKG: (2R)-2,3-dihydroxypropyl hexadecanoate(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Shima, Y. et al., Crystal structures of lysophospholipid-bound MHC class I molecules. J.Biol.Chem. (2020)
- Release Date
- 2020-04-29
- Peptides
- MHC class I antigen: A
Beta-2-microglobulin: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B