SMTL ID : 6lcy.1

Crystal structure of Synaptotagmin-7 C2B in complex with IP6

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

2 x IHP: INOSITOL HEXAKISPHOSPHATE(Non-covalent)

IHP.1: 8 residues within 4Å: Chain A: Y.47, K.49, W.51, R.58, K.61, K.63, M.98, N.106 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:Y.47, A:N.106 Water bridges: A:K.49, A:R.58, A:R.58 Salt bridges: A:K.49, A:K.49, A:R.58, A:K.61, A:K.61, A:K.61, A:K.63, A:K.63, A:K.63 IHP.2: 3 residues within 4Å: Chain A: K.31, R.33, W.140 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:K.31, A:K.31, A:R.33

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, X. et al., 5-IP 7 is a GPCR messenger mediating neural control of synaptotagmin-dependent insulin exocytosis and glucose homeostasis. Nat Metab (2021)

Release Date

2021-03-03

Peptides

Synaptotagmin-7: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Synaptotagmin-7