SMTL ID : 6lfl.1

Crystal structure of a class A GPCR

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

monomer

Ligands

1 x EBX: 4-[[3,4-bis(oxidanylidene)-2-[[(1~{R})-1-(4-propan-2-ylfuran-2-yl)propyl]amino]cyclobuten-1-yl]amino]-~{N},~{N}-dimethyl-3-oxidanyl-pyridine-2-carboxamide(Non-covalent)

EBX.1: 18 residues within 4Å: Chain A: V.36, I.37, S.40, G.43, R.44, S.45, T.47, D.48, L.51, R.108, E.407, V.410, I.411, Y.472, G.476, Q.477, K.478, F.479 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:I.37, A:R.44, A:I.411, A:Y.472, A:K.478, A:K.478, A:F.479 Hydrogen bonds: A:S.45, A:S.45, A:T.47, A:D.48, A:D.48, A:K.478, A:F.479

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, K. et al., Structural basis of CXC chemokine receptor 2 activation and signalling. Nature (2020)

Release Date

2020-09-02

Peptides

C-X-C chemokine receptor type 2,GlgA glycogen synthase,C-X-C chemokine receptor type 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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C-X-C chemokine receptor type 2,GlgA glycogen synthase,C-X-C chemokine receptor type 2