SMTL ID : 6lg5.1

Crystal Structure of the first bromodomain of human BRD4 in complex with compound BDF-1038

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.83 Å

Oligo State

monomer

Ligands

1 x EC3: 1-[(5-chloranyl-8-oxidanyl-quinolin-7-yl)methyl]pyrrolidin-2-one(Non-covalent)

EC3.1: 9 residues within 4Å: Chain A: P.40, F.41, V.45, L.50, L.52, C.94, Y.97, N.98, I.104 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.41, A:L.50, A:L.52, A:I.104 Hydrogen bonds: A:N.98, A:N.98

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, H. et al., Lead-Opt: An efficient tool for structural optimization of lead compounds. To Be Published

Release Date

2020-12-09

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

Related Entries With Identical Sequence