SMTL ID : 6lg9.1

crystal structure of the first bromodomain of human BRD4 in complex with compound BDF-2143

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.81 Å

Oligo State

monomer

Ligands

1 x ECU: 2-azanyl-7-bromanyl-4-imidazol-1-yl-quinolin-8-ol(Non-covalent)

ECU.1: 12 residues within 4Å: Chain A: W.39, P.40, F.41, V.45, L.50, L.52, Y.55, M.90, C.94, Y.97, N.98, I.104 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:F.41, A:V.45, A:L.52, A:I.104, A:I.104 Hydrogen bonds: A:Y.55, A:N.93, A:N.98, A:N.98 Water bridges: A:Q.43 Halogen bonds: A:M.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, H. et al., Lead-Opt: An efficient tool for structural optimization of lead compounds. To Be Published

Release Date

2020-12-09

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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