SMTL ID : 6lim.1

BRD4-BD1 bound with compound 40

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.76 Å

Oligo State

monomer

Ligands

1 x EE9: (3~{R})-6-[(4-isoquinolin-4-ylpyrimidin-2-yl)amino]-1,3-dimethyl-4-propan-2-yl-3~{H}-quinoxalin-2-one(Non-covalent)

EE9.1: 15 residues within 4Å: Chain A: W.39, P.40, F.41, Q.43, V.45, K.49, L.50, L.52, Y.55, C.94, Y.97, N.98, D.103, I.104, M.107 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:W.39, A:P.40, A:V.45, A:L.50, A:L.50, A:Y.55, A:Y.97, A:D.103, A:I.104, A:I.104, A:I.104 Hydrogen bonds: A:K.49, A:N.98 Water bridges: A:Q.43 pi-Stacking: A:W.39

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xiong, B. et al., BRD4-BD1 bound with compound 40. To Be Published

Release Date

2020-12-16

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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