- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 5 residues within 4Å:- Chain A: D.149, E.197, H.261, H.278
- Ligands: 7LH.3
4 PLIP interactions:3 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:E.197, A:H.261, A:H.278, H2O.2
MG.8: 5 residues within 4Å:- Chain B: D.149, E.197, H.261, H.278
- Ligands: 7LH.9
4 PLIP interactions:3 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:E.197, B:H.261, B:H.278, H2O.6
- 2 x 7LH: (1R,3R,4S,5R)-3-[3-[3,4-bis(oxidanyl)phenyl]propanoyloxy]-1,4,5-tris(oxidanyl)cyclohexane-1-carboxylic acid(Non-covalent)
7LH.3: 14 residues within 4Å:- Chain A: D.149, K.155, E.197, K.200, K.239, R.254, L.257, N.258, H.261, T.262, H.265, H.278
- Ligands: NAD.1, MG.2
14 PLIP interactions:14 interactions with chain A- Hydrophobic interactions: A:H.261, A:H.265
- Hydrogen bonds: A:K.200, A:K.200, A:T.262
- Water bridges: A:D.149, A:K.155, A:N.165, A:N.258, A:H.278, A:H.278
- Salt bridges: A:K.155, A:K.239, A:R.254
7LH.9: 11 residues within 4Å:- Chain B: D.149, K.155, K.200, K.239, R.254, N.258, H.261, T.262, H.265
- Ligands: NAD.7, MG.8
14 PLIP interactions:14 interactions with chain B- Hydrophobic interactions: B:K.155, B:N.258, B:H.261, B:H.265
- Hydrogen bonds: B:K.155, B:K.200, B:N.258
- Water bridges: B:D.149, B:D.149, B:K.155
- Salt bridges: B:K.155, B:K.155, B:K.239, B:R.254
- 3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.4: 4 residues within 4Å:- Chain A: V.19, T.20, Q.241, A.244
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:T.20
EDO.5: 8 residues within 4Å:- Chain A: N.258, L.259, G.260, H.261, T.262, F.263, A.289, I.347
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:G.260, A:G.260, A:T.262, A:T.262, A:F.263, A:I.347, A:I.347
EDO.6: 4 residues within 4Å:- Chain A: W.276, P.317, T.319, G.320
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:T.319
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Neetu, N. et al., Structural and Biochemical Analyses Reveal that Chlorogenic Acid Inhibits the Shikimate Pathway. J.Bacteriol. (2020)
- Release Date
- 2020-07-29
- Peptides
- 3-dehydroquinate synthase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 2 x 7LH: (1R,3R,4S,5R)-3-[3-[3,4-bis(oxidanyl)phenyl]propanoyloxy]-1,4,5-tris(oxidanyl)cyclohexane-1-carboxylic acid(Non-covalent)
- 3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Neetu, N. et al., Structural and Biochemical Analyses Reveal that Chlorogenic Acid Inhibits the Shikimate Pathway. J.Bacteriol. (2020)
- Release Date
- 2020-07-29
- Peptides
- 3-dehydroquinate synthase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
C