SMTL ID : 6lmr.1

Solution structure of cold shock domain and ssDNA complex

Coordinates

PDB Format Compare

Method

SOLUTION NMR

Oligo State

monomer

Ligands

1 x DA- DA- DC- DA- DC- DC- DT: DNA (5'-D(P*AP*AP*CP*AP*CP*CP*T)-3')(Non-covalent)

DA-DA-DC-DA-DC-DC-DT.1: 19 residues within 4Å: Chain A: K.25, K.37, W.38, F.39, N.40, V.41, R.42, N.43, Y.45, F.47, D.56, F.58, H.60, E.90, K.91, E.94, S.109, K.110, Y.111 Protein-ligand interaction information (PLIP) not available

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, J. et al., Structural basis of DNA binding to human YB-1 cold shock domain regulated by phosphorylation. Nucleic Acids Res. (2020)

Release Date

2020-07-22

Peptides

Y-box-binding protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Y-box-binding protein 1