SMTL ID : 6loj.1

The complex structure of IpaH9.8-LRR and hGBP1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.72 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 14 residues within 4Å: Chain B: L.49, Y.50, R.51, T.52, G.53, K.54, S.55, Y.56, T.101, E.102, G.103, D.187, F.241, A.251 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:R.51, B:T.52, B:T.52, B:G.53, B:K.54, B:S.55, B:E.102 Salt bridges: B:D.187

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ye, Y. et al., Substrate-binding destabilizes the hydrophobic cluster to relieve the autoinhibition of bacterial ubiquitin ligase IpaH9.8. Commun Biol (2020)

Release Date

2020-12-23

Peptides

Invasion plasmid antigen: A
Guanylate-binding protein 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Invasion plasmid antigen

Guanylate-binding protein 1