SMTL ID : 6ltz.1

Induced DNA bending by unique dimerization of HigA antitoxin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.97 Å

Oligo State

homo-dimer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: R.66, T.78, E.79, T.82 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.79, A:T.82 GOL.2: 4 residues within 4Å: Chain A: R.45, K.46, R.52, Q.53 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.45, A:R.45, A:K.46, A:Q.53 Water bridges: A:A.54

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.3: 6 residues within 4Å: Chain B: R.45, K.46, R.52, Q.53, A.54, Q.64 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:R.45, B:R.45, B:K.46, B:Q.53, B:A.54, B:Q.64 Water bridges: B:R.52, B:Q.53

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.4: 3 residues within 4Å: Chain B: V.62, S.63, R.66 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.63, B:S.63 PEG.5: 4 residues within 4Å: Chain B: M.60, R.66, T.82, A.85 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:M.60, B:R.66, B:R.66

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Park, J.Y. et al., Induced DNA bending by unique dimerization of HigA antitoxin. Iucrj (2020)

Release Date

2020-07-15

Peptides

Putative antitoxin HigA3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Putative antitoxin HigA3

Related Entries With Identical Sequence