SMTL ID : 6lu6.1

Crystal structure of BPTF-BRD with ligand DCBPin5-2 bound

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.97 Å

Oligo State

monomer

Ligands

1 x EUU: 6-[1-[3-(dimethylamino)propyl]indol-5-yl]-2-methylsulfonyl-N-propyl-pyrimidin-4-amine(Non-covalent)

EUU.1: 13 residues within 4Å: Chain A: W.27, P.28, F.29, V.33, D.34, D.37, A.38, P.39, Y.41, C.80, Y.83, N.84, F.90 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:P.28, A:D.37, A:F.90 Hydrogen bonds: A:N.84, A:N.84 Salt bridges: A:D.34, A:D.37 pi-Stacking: A:W.27, A:W.27, A:F.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lu, T. et al., Discovery and Optimization of Small-Molecule Inhibitors for the BPTF Bromodomains Proteins. To Be Published

Release Date

2021-04-28

Peptides

Nucleosome-remodeling factor subunit BPTF: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nucleosome-remodeling factor subunit BPTF