- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.09 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)
- 4 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 3 residues within 4Å:- Chain A: E.219, S.222
- Ligands: ANP.1
3 PLIP interactions:3 interactions with chain A- Metal complexes: A:E.219, A:E.219, A:S.222
MG.3: 3 residues within 4Å:- Chain A: Q.110, R.153
- Ligands: ANP.1
No protein-ligand interaction detected (PLIP)MG.6: 3 residues within 4Å:- Chain B: E.219, S.222
- Ligands: ANP.5
3 PLIP interactions:3 interactions with chain B- Metal complexes: B:E.219, B:E.219, B:S.222
MG.7: 3 residues within 4Å:- Chain B: Q.110, R.153
- Ligands: ANP.5
No protein-ligand interaction detected (PLIP)- 2 x TRF: N1-FORMYL-TRYPTOPHAN(Non-covalent)
TRF.4: 18 residues within 4Å:- Chain A: M.123, L.124, A.125, P.126, L.128, R.153, M.167, G.169, F.170, Q.171, S.222, A.223, G.224, W.240, G.242, A.243, G.244
- Ligands: ANP.1
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:L.128
- Hydrogen bonds: A:L.124, A:A.125
- Water bridges: A:Q.171
TRF.8: 18 residues within 4Å:- Chain B: M.123, L.124, A.125, P.126, L.128, R.153, M.167, G.169, F.170, Q.171, S.222, A.223, G.224, W.240, G.242, A.243, G.244
- Ligands: ANP.5
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:L.128
- Hydrogen bonds: B:L.124, B:A.125
- Water bridges: B:Q.171
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Jiang, H.K. et al., Probing the Active Site of Deubiquitinase USP30 with Noncanonical Tryptophan Analogues. Biochemistry (2020)
- Release Date
- 2020-07-08
- Peptides
- Pyrrolysine--tRNA ligase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.09 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)
- 4 x MG: MAGNESIUM ION(Non-covalent)
- 2 x TRF: N1-FORMYL-TRYPTOPHAN(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Jiang, H.K. et al., Probing the Active Site of Deubiquitinase USP30 with Noncanonical Tryptophan Analogues. Biochemistry (2020)
- Release Date
- 2020-07-08
- Peptides
- Pyrrolysine--tRNA ligase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A