SMTL ID : 6lyg.1

Cryo-EM structure of the calcium homeostasis modulator 1 channel

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-octamer

Ligands

8 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 5 residues within 4Å: Chain A: N.151, S.153, Y.154, H.178, E.179 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.153 NAG.2: 5 residues within 4Å: Chain B: N.151, S.153, Y.154, H.178, E.179 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.153 NAG.3: 5 residues within 4Å: Chain C: N.151, S.153, Y.154, H.178, E.179 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:S.153 NAG.4: 5 residues within 4Å: Chain D: N.151, S.153, Y.154, H.178, E.179 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:S.153 NAG.5: 5 residues within 4Å: Chain E: N.151, S.153, Y.154, H.178, E.179 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:S.153 NAG.6: 5 residues within 4Å: Chain F: N.151, S.153, Y.154, H.178, E.179 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:S.153 NAG.7: 5 residues within 4Å: Chain G: N.151, S.153, Y.154, H.178, E.179 1 PLIP interactions: 1 interactions with chain G Hydrogen bonds: G:S.153 NAG.8: 5 residues within 4Å: Chain H: N.151, S.153, Y.154, H.178, E.179 1 PLIP interactions: 1 interactions with chain H Hydrogen bonds: H:S.153

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ren, Y. et al., Cryo-EM structure of the calcium homeostasis modulator 1 channel. Sci Adv (2020)

Release Date

2020-10-07

Peptides

Calcium homeostasis modulator 1: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

Membrane

We predict this structure to be a membrane protein.
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Calcium homeostasis modulator 1

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